DuckDB is an embedded database, similar to SQLite, but designed for OLAP-style analytics. It is crazy fast and allows you to read and write data stored in CSV, JSON, and Parquet files directly, ...

KAT is a suite of tools that analyse jellyfish hashes or sequence files (fasta or fastq) using kmer counts. The following tools are currently available in KAT: kmer: Produces a k-mer hash containing ...